STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001661495_00788Unannotated protein. (1166 aa)    
Predicted Functional Partners:
GCA_001661495_01119
Unannotated protein.
 
0.999
GCA_001661495_00670
Unannotated protein.
 
 
0.997
GCA_001661495_02444
Unannotated protein.
 
 
0.996
GCA_001661495_02067
Unannotated protein.
 
 
0.995
GCA_001661495_04479
Unannotated protein.
 
 
0.995
GCA_001661495_00230
Unannotated protein.
 
 
0.994
GCA_001661495_00774
Unannotated protein.
 
 
0.994
GCA_001661495_02006
Unannotated protein.
 
 
0.994
GCA_001661495_03878
Unannotated protein.
   
 0.979
GCA_001661495_01023
Unannotated protein.
 
 
0.962
Your Current Organism:
Pseudoalteromonas prydzensis
NCBI taxonomy Id: 182141
Other names: ACAM 620, CIP 105820, DSM 14232, LMG 21428, LMG:21428, P. prydzensis, strain MB8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.