STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001661495_03532Unannotated protein. (625 aa)    
Predicted Functional Partners:
GCA_001661495_03037
Unannotated protein.
  
 
 
 0.909
GCA_001661495_03531
Unannotated protein.
 
   
 0.872
GCA_001661495_03530
Unannotated protein.
  
    0.861
GCA_001661495_03529
Unannotated protein.
  
    0.844
GCA_001661495_03533
Unannotated protein.
       0.781
GCA_001661495_03760
Unannotated protein.
  
   
 0.709
GCA_001661495_01477
Unannotated protein.
  
     0.678
GCA_001661495_02403
Unannotated protein.
  
    0.644
GCA_001661495_03786
Unannotated protein.
  
   
 0.642
GCA_001661495_02469
Unannotated protein.
  
     0.638
Your Current Organism:
Pseudoalteromonas prydzensis
NCBI taxonomy Id: 182141
Other names: ACAM 620, CIP 105820, DSM 14232, LMG 21428, LMG:21428, P. prydzensis, strain MB8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.