STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001661495_03648Unannotated protein. (890 aa)    
Predicted Functional Partners:
GCA_001661495_02527
Unannotated protein.
  
 
  0.913
GCA_001661495_01632
Unannotated protein.
 
  
 0.875
GCA_001661495_00423
Unannotated protein.
  
  
  0.839
GCA_001661495_02913
Unannotated protein.
 
  
 0.829
GCA_001661495_00630
Unannotated protein.
    
  0.820
GCA_001661495_01010
Unannotated protein.
    
  0.820
GCA_001661495_01502
Unannotated protein.
    
  0.820
GCA_001661495_01808
Unannotated protein.
    
  0.820
GCA_001661495_03617
Unannotated protein.
    
  0.820
GCA_001661495_01702
Unannotated protein.
    
  0.806
Your Current Organism:
Pseudoalteromonas prydzensis
NCBI taxonomy Id: 182141
Other names: ACAM 620, CIP 105820, DSM 14232, LMG 21428, LMG:21428, P. prydzensis, strain MB8-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.