STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HCW_04325Hypothetical protein. (382 aa)    
Predicted Functional Partners:
HCW_03615
Flagellar motor switch protein FliY; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation.
    
   0.786
HCW_00165
COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.696
HCW_04320
Hypothetical protein.
       0.678
HCW_06850
Viral A-type inclusion protein repeat protein.
  
  
 0.455
HCW_04315
Hypothetical protein.
       0.448
HCW_04295
Cag island DNA transfer protein; COG3505 Type IV secretory pathway, VirD4 components.
       0.440
HCW_04300
Hypothetical protein.
       0.440
HCW_04305
Hypothetical protein.
       0.440
HCW_04310
Hypothetical protein.
       0.440
HCW_04330
COG0550 Topoisomerase IA.
       0.404
Your Current Organism:
Helicobacter cetorum MIT007128
NCBI taxonomy Id: 182217
Other names: H. cetorum MIT 00-7128, Helicobacter cetorum MIT 00-7128, Helicobacter cetorum str. MIT 00-7128, Helicobacter cetorum strain MIT 00-7128, Helicobacter sp. MIT 00-7128
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.