STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001463825_00223Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_001463825_01637
Unannotated protein.
 0.951
GCA_001463825_00738
Unannotated protein.
 
  0.932
GCA_001463825_01368
Unannotated protein.
 
 0.915
GCA_001463825_03357
Unannotated protein.
 
 0.915
GCA_001463825_04196
Unannotated protein.
  
 
 0.887
GCA_001463825_01729
Unannotated protein.
   
 0.876
GCA_001463825_03719
Unannotated protein.
 0.872
GCA_001463825_03167
Unannotated protein.
0.854
GCA_001463825_00128
Unannotated protein.
0.852
GCA_001463825_03764
Unannotated protein.
 
 
  0.815
Your Current Organism:
Aurantimonas coralicida
NCBI taxonomy Id: 182270
Other names: A. coralicida, Aurantimonas coralicida Denner et al. 2003 emend. Rathsack et al. 2011, CCUG 53900, CIP 107386, DSM 14790, NBRC 107846, strain WP1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.