STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001463825_00493Unannotated protein. (418 aa)    
Predicted Functional Partners:
GCA_001463825_00492
Unannotated protein.
  
    0.629
GCA_001463825_01409
Unannotated protein.
   
    0.601
GCA_001463825_03818
Unannotated protein.
   
    0.601
GCA_001463825_01292
Unannotated protein.
   
    0.594
GCA_001463825_02129
Unannotated protein.
    
  0.566
GCA_001463825_01915
Unannotated protein.
 
  
  0.538
GCA_001463825_01299
Unannotated protein.
    
  0.469
GCA_001463825_02128
Unannotated protein.
    
  0.469
GCA_001463825_00222
Unannotated protein.
   
 
  0.461
GCA_001463825_03578
Unannotated protein.
 
  
 0.458
Your Current Organism:
Aurantimonas coralicida
NCBI taxonomy Id: 182270
Other names: A. coralicida, Aurantimonas coralicida Denner et al. 2003 emend. Rathsack et al. 2011, CCUG 53900, CIP 107386, DSM 14790, NBRC 107846, strain WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.