STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001463825_01266Unannotated protein. (217 aa)    
Predicted Functional Partners:
GCA_001463825_00470
Unannotated protein.
  
 
 0.953
GCA_001463825_00200
Unannotated protein.
  
 
 0.945
GCA_001463825_04210
Unannotated protein.
  
 
 0.930
GCA_001463825_00199
Unannotated protein.
  
 
 0.917
GCA_001463825_01267
Unannotated protein.
       0.791
GCA_001463825_00212
Unannotated protein.
  
 
 0.755
GCA_001463825_04048
Unannotated protein.
  
  
  0.741
GCA_001463825_01948
Unannotated protein.
    
 0.661
GCA_001463825_03789
Unannotated protein.
     
 0.618
GCA_001463825_00115
Unannotated protein.
    
  0.589
Your Current Organism:
Aurantimonas coralicida
NCBI taxonomy Id: 182270
Other names: A. coralicida, Aurantimonas coralicida Denner et al. 2003 emend. Rathsack et al. 2011, CCUG 53900, CIP 107386, DSM 14790, NBRC 107846, strain WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.