STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001463825_02724Unannotated protein. (362 aa)    
Predicted Functional Partners:
GCA_001463825_02723
Unannotated protein.
 
     0.808
GCA_001463825_02722
Unannotated protein.
       0.778
GCA_001463825_02749
Unannotated protein.
  
     0.692
GCA_001463825_00145
Unannotated protein.
  
    0.627
GCA_001463825_00694
Unannotated protein.
  
     0.581
GCA_001463825_00353
Unannotated protein.
  
     0.571
GCA_001463825_01136
Unannotated protein.
  
     0.569
GCA_001463825_01349
Unannotated protein.
  
     0.566
GCA_001463825_02045
Unannotated protein.
  
     0.560
GCA_001463825_02092
Unannotated protein.
  
     0.545
Your Current Organism:
Aurantimonas coralicida
NCBI taxonomy Id: 182270
Other names: A. coralicida, Aurantimonas coralicida Denner et al. 2003 emend. Rathsack et al. 2011, CCUG 53900, CIP 107386, DSM 14790, NBRC 107846, strain WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.