STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001463825_02733Unannotated protein. (175 aa)    
Predicted Functional Partners:
GCA_001463825_02734
Unannotated protein.
       0.773
GCA_001463825_02731
Unannotated protein.
       0.768
GCA_001463825_02732
Unannotated protein.
       0.768
GCA_001463825_02736
Unannotated protein.
     
 0.672
GCA_001463825_00881
Unannotated protein.
 
  
 0.666
GCA_001463825_02735
Unannotated protein.
       0.613
GCA_001463825_02552
Unannotated protein.
     
 0.535
GCA_001463825_00194
Unannotated protein.
 
    0.523
GCA_001463825_01330
Unannotated protein.
 
 
 
 0.497
GCA_001463825_02737
Unannotated protein.
       0.436
Your Current Organism:
Aurantimonas coralicida
NCBI taxonomy Id: 182270
Other names: A. coralicida, Aurantimonas coralicida Denner et al. 2003 emend. Rathsack et al. 2011, CCUG 53900, CIP 107386, DSM 14790, NBRC 107846, strain WP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.