STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAP86178.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
OAP85526.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.958
OAP86179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.955
OAP86771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.903
OAP86176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.883
OAP86097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.880
OAP86435.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.866
OAP86500.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.840
OAP86180.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.833
OAP86501.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.831
OAP86177.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.794
Your Current Organism:
Actinomycetaceae bacterium BA112
NCBI taxonomy Id: 1823756
Other names: A. bacterium BA112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.