STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBW_0750Twitching motility protein PilT. (128 aa)    
Predicted Functional Partners:
DBW_0751
Prevent-host-death protein.
 
    0.953
vapC
Toxin, PIN family; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
   
 0.577
DBW_0752
Hypothetical protein.
       0.561
DBW_0753
Hypothetical protein.
       0.561
DBW_2401
Nucleotide-binding protein.
  
   
 0.522
DBW_0754
DNA methyltransferase.
 
     0.487
higB-2
Toxin HigB-2.
  
     0.469
DBW_2538
Antitoxin HicB.
  
     0.454
Your Current Organism:
Desulfuromonas sp. DDH964
NCBI taxonomy Id: 1823759
Other names: D. sp. DDH964
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.