STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBW_2789Response receiver-modulated diguanylate cyclase. (641 aa)    
Predicted Functional Partners:
DBW_2914
Response receiver-modulated diguanylate cyclase.
 
 
0.933
DBW_1368
Response receiver-modulated diguanylate cyclase.
  
 
0.919
DBW_3299
Sensor diguanylate cyclase/phosphodiesterase, HAMP and PAS domain-containing.
  
   0.700
DBW_1037
Sensor histidine kinase response regulator, HAMP and Hpt domain-containing.
 
 
 0.689
DBW_1901
Response receiver-modulated cyclic diguanylate phosphodiesterase.
 
    0.651
DBW_1946
Sensor histidine kinase response regulator, Hpt domain-containing.
 
 
 0.641
DBW_1303
Sensor histidine kinase response regulator, HAMP and Hpt domain-containing.
 
 
 0.599
DBW_3302
Response receiver-modulated cyclic diguanylate phosphodiesterase.
 
    0.585
DBW_2475
Sensor cyclic diguanylate phosphodiesterase, GAF and GAF domain-containing.
 
   0.575
DBW_2539
Response receiver-modulated cyclic diguanylate phosphodiesterase.
 
   0.575
Your Current Organism:
Desulfuromonas sp. DDH964
NCBI taxonomy Id: 1823759
Other names: D. sp. DDH964
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