Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CysK_1 | CysK_2 | SAMN05444423_1011033 | SAMN05444423_11427 | Cysteine synthase A. | Cysteine synthase A. | 0.914 |
CysK_1 | CysK_3 | SAMN05444423_1011033 | SAMN05444423_104108 | Cysteine synthase A. | Cysteine synthase A. | 0.927 |
CysK_1 | CysK_4 | SAMN05444423_1011033 | SAMN05444423_10983 | Cysteine synthase A. | Cysteine synthase A. | 0.910 |
CysK_1 | CysK_5 | SAMN05444423_1011033 | SAMN05444423_10812 | Cysteine synthase A. | Cysteine synthase A. | 0.927 |
CysK_1 | NarB_1 | SAMN05444423_1011033 | SAMN05444423_1011054 | Cysteine synthase A. | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.943 |
CysK_1 | SFL82163.1 | SAMN05444423_1011033 | SAMN05444423_1011032 | Cysteine synthase A. | Protein of unknown function. | 0.869 |
CysK_1 | metB | SAMN05444423_1011033 | SAMN05444423_1011389 | Cysteine synthase A. | Cystathionine gamma-lyase. | 0.955 |
CysK_1 | metZ | SAMN05444423_1011033 | SAMN05444423_101747 | Cysteine synthase A. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.951 |
CysK_1 | serC | SAMN05444423_1011033 | SAMN05444423_103499 | Cysteine synthase A. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.918 |
CysK_1 | sirA | SAMN05444423_1011033 | SAMN05444423_104329 | Cysteine synthase A. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.941 |
CysK_2 | CysK_1 | SAMN05444423_11427 | SAMN05444423_1011033 | Cysteine synthase A. | Cysteine synthase A. | 0.914 |
CysK_2 | NarB_1 | SAMN05444423_11427 | SAMN05444423_1011054 | Cysteine synthase A. | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.458 |
CysK_2 | metB | SAMN05444423_11427 | SAMN05444423_1011389 | Cysteine synthase A. | Cystathionine gamma-lyase. | 0.682 |
CysK_2 | metZ | SAMN05444423_11427 | SAMN05444423_101747 | Cysteine synthase A. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.614 |
CysK_2 | serC | SAMN05444423_11427 | SAMN05444423_103499 | Cysteine synthase A. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.912 |
CysK_2 | sirA | SAMN05444423_11427 | SAMN05444423_104329 | Cysteine synthase A. | Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.434 |
CysK_3 | CysK_1 | SAMN05444423_104108 | SAMN05444423_1011033 | Cysteine synthase A. | Cysteine synthase A. | 0.927 |
CysK_3 | NarB_1 | SAMN05444423_104108 | SAMN05444423_1011054 | Cysteine synthase A. | Sulfite reductase (NADPH) alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.458 |
CysK_3 | metB | SAMN05444423_104108 | SAMN05444423_1011389 | Cysteine synthase A. | Cystathionine gamma-lyase. | 0.641 |
CysK_3 | metZ | SAMN05444423_104108 | SAMN05444423_101747 | Cysteine synthase A. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.594 |
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