Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ClpC_1 | CysK_1 | SAMN05444423_1011036 | SAMN05444423_1011033 | Clp amino terminal domain-containing protein, pathogenicity island component. | Cysteine synthase A. | 0.568 |
ClpC_1 | SFL68908.1 | SAMN05444423_1011036 | SAMN05444423_101540 | Clp amino terminal domain-containing protein, pathogenicity island component. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.478 |
ClpC_1 | SFL82163.1 | SAMN05444423_1011036 | SAMN05444423_1011032 | Clp amino terminal domain-containing protein, pathogenicity island component. | Protein of unknown function. | 0.555 |
ClpC_1 | SFL82247.1 | SAMN05444423_1011036 | SAMN05444423_1011035 | Clp amino terminal domain-containing protein, pathogenicity island component. | Hypothetical protein. | 0.939 |
ClpC_1 | SFL82290.1 | SAMN05444423_1011036 | SAMN05444423_1011037 | Clp amino terminal domain-containing protein, pathogenicity island component. | Putative membrane protein. | 0.690 |
ClpC_1 | YbhR | SAMN05444423_1011036 | SAMN05444423_110224 | Clp amino terminal domain-containing protein, pathogenicity island component. | ABC-2 type transport system permease protein. | 0.461 |
ClpC_1 | YyaP_1 | SAMN05444423_1011036 | SAMN05444423_1011034 | Clp amino terminal domain-containing protein, pathogenicity island component. | Dihydrofolate reductase. | 0.610 |
CysK_1 | ClpC_1 | SAMN05444423_1011033 | SAMN05444423_1011036 | Cysteine synthase A. | Clp amino terminal domain-containing protein, pathogenicity island component. | 0.568 |
CysK_1 | SFL82124.1 | SAMN05444423_1011033 | SAMN05444423_1011031 | Cysteine synthase A. | DNA binding domain-containing protein, excisionase family. | 0.622 |
CysK_1 | SFL82163.1 | SAMN05444423_1011033 | SAMN05444423_1011032 | Cysteine synthase A. | Protein of unknown function. | 0.869 |
CysK_1 | SFL82247.1 | SAMN05444423_1011033 | SAMN05444423_1011035 | Cysteine synthase A. | Hypothetical protein. | 0.554 |
CysK_1 | SFL82290.1 | SAMN05444423_1011033 | SAMN05444423_1011037 | Cysteine synthase A. | Putative membrane protein. | 0.413 |
CysK_1 | YyaP_1 | SAMN05444423_1011033 | SAMN05444423_1011034 | Cysteine synthase A. | Dihydrofolate reductase. | 0.623 |
SFL68908.1 | ClpC_1 | SAMN05444423_101540 | SAMN05444423_1011036 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Clp amino terminal domain-containing protein, pathogenicity island component. | 0.478 |
SFL68908.1 | SFL82247.1 | SAMN05444423_101540 | SAMN05444423_1011035 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Hypothetical protein. | 0.408 |
SFL68908.1 | SFL82290.1 | SAMN05444423_101540 | SAMN05444423_1011037 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Putative membrane protein. | 0.440 |
SFL82124.1 | CysK_1 | SAMN05444423_1011031 | SAMN05444423_1011033 | DNA binding domain-containing protein, excisionase family. | Cysteine synthase A. | 0.622 |
SFL82124.1 | SFL82163.1 | SAMN05444423_1011031 | SAMN05444423_1011032 | DNA binding domain-containing protein, excisionase family. | Protein of unknown function. | 0.696 |
SFL82124.1 | SFL82247.1 | SAMN05444423_1011031 | SAMN05444423_1011035 | DNA binding domain-containing protein, excisionase family. | Hypothetical protein. | 0.446 |
SFL82124.1 | YyaP_1 | SAMN05444423_1011031 | SAMN05444423_1011034 | DNA binding domain-containing protein, excisionase family. | Dihydrofolate reductase. | 0.419 |
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