Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PcpB_1 | SFL83744.1 | SAMN05444423_1011091 | SAMN05444423_1011092 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Transcriptional regulator, ArsR family. | 0.537 |
PcpB_1 | SFL83767.1 | SAMN05444423_1011091 | SAMN05444423_1011093 | 2-polyprenyl-6-methoxyphenol hydroxylase. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.541 |
SFL83744.1 | PcpB_1 | SAMN05444423_1011092 | SAMN05444423_1011091 | Transcriptional regulator, ArsR family. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.537 |
SFL83744.1 | SFL83767.1 | SAMN05444423_1011092 | SAMN05444423_1011093 | Transcriptional regulator, ArsR family. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.939 |
SFL83744.1 | ZiaR_4 | SAMN05444423_1011092 | SAMN05444423_102800 | Transcriptional regulator, ArsR family. | Transcriptional regulator, ArsR family. | 0.765 |
SFL83767.1 | PcpB_1 | SAMN05444423_1011093 | SAMN05444423_1011091 | Uncharacterized conserved protein YndB, AHSA1/START domain. | 2-polyprenyl-6-methoxyphenol hydroxylase. | 0.541 |
SFL83767.1 | SFL83744.1 | SAMN05444423_1011093 | SAMN05444423_1011092 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Transcriptional regulator, ArsR family. | 0.939 |
SFL83767.1 | ZiaR_4 | SAMN05444423_1011093 | SAMN05444423_102800 | Uncharacterized conserved protein YndB, AHSA1/START domain. | Transcriptional regulator, ArsR family. | 0.545 |
ZiaR_4 | SFL83744.1 | SAMN05444423_102800 | SAMN05444423_1011092 | Transcriptional regulator, ArsR family. | Transcriptional regulator, ArsR family. | 0.765 |
ZiaR_4 | SFL83767.1 | SAMN05444423_102800 | SAMN05444423_1011093 | Transcriptional regulator, ArsR family. | Uncharacterized conserved protein YndB, AHSA1/START domain. | 0.545 |