Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL92002.1 | SFL92032.1 | SAMN05444423_1011395 | SAMN05444423_1011396 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Haloacid dehalogenase-like hydrolase. | 0.514 |
SFL92002.1 | SFL92061.1 | SAMN05444423_1011395 | SAMN05444423_1011397 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Hypothetical protein. | 0.514 |
SFL92002.1 | eutB | SAMN05444423_1011395 | SAMN05444423_1011399 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Ethanolamine ammonia-lyase heavy chain. | 0.501 |
SFL92002.1 | eutC | SAMN05444423_1011395 | SAMN05444423_1011398 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Ethanolamine ammonia-lyase light chain; Belongs to the EutC family. | 0.495 |
SFL92002.1 | eutP | SAMN05444423_1011395 | SAMN05444423_1011400 | ADP-ribose pyrophosphatase YjhB, NUDIX family. | Ethanolamine:proton symporter, EAT family. | 0.452 |
SFL92032.1 | SFL92002.1 | SAMN05444423_1011396 | SAMN05444423_1011395 | Haloacid dehalogenase-like hydrolase. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.514 |
SFL92032.1 | SFL92061.1 | SAMN05444423_1011396 | SAMN05444423_1011397 | Haloacid dehalogenase-like hydrolase. | Hypothetical protein. | 0.773 |
SFL92032.1 | eutB | SAMN05444423_1011396 | SAMN05444423_1011399 | Haloacid dehalogenase-like hydrolase. | Ethanolamine ammonia-lyase heavy chain. | 0.769 |
SFL92032.1 | eutC | SAMN05444423_1011396 | SAMN05444423_1011398 | Haloacid dehalogenase-like hydrolase. | Ethanolamine ammonia-lyase light chain; Belongs to the EutC family. | 0.769 |
SFL92032.1 | eutP | SAMN05444423_1011396 | SAMN05444423_1011400 | Haloacid dehalogenase-like hydrolase. | Ethanolamine:proton symporter, EAT family. | 0.711 |
SFL92032.1 | hisA | SAMN05444423_1011396 | SAMN05444423_11047 | Haloacid dehalogenase-like hydrolase. | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. | 0.507 |
SFL92032.1 | hisB | SAMN05444423_1011396 | SAMN05444423_11040 | Haloacid dehalogenase-like hydrolase. | Imidazoleglycerol-phosphate dehydratase. | 0.498 |
SFL92032.1 | hisF | SAMN05444423_1011396 | SAMN05444423_11049 | Haloacid dehalogenase-like hydrolase. | Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. | 0.568 |
SFL92032.1 | hisH | SAMN05444423_1011396 | SAMN05444423_11041 | Haloacid dehalogenase-like hydrolase. | Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. | 0.522 |
SFL92032.1 | hisI | SAMN05444423_1011396 | SAMN05444423_11059 | Haloacid dehalogenase-like hydrolase. | phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP. | 0.501 |
SFL92061.1 | SFL92002.1 | SAMN05444423_1011397 | SAMN05444423_1011395 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family. | 0.514 |
SFL92061.1 | SFL92032.1 | SAMN05444423_1011397 | SAMN05444423_1011396 | Hypothetical protein. | Haloacid dehalogenase-like hydrolase. | 0.773 |
SFL92061.1 | eutB | SAMN05444423_1011397 | SAMN05444423_1011399 | Hypothetical protein. | Ethanolamine ammonia-lyase heavy chain. | 0.769 |
SFL92061.1 | eutC | SAMN05444423_1011397 | SAMN05444423_1011398 | Hypothetical protein. | Ethanolamine ammonia-lyase light chain; Belongs to the EutC family. | 0.769 |
SFL92061.1 | eutP | SAMN05444423_1011397 | SAMN05444423_1011400 | Hypothetical protein. | Ethanolamine:proton symporter, EAT family. | 0.711 |
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