STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YedY_3DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. (221 aa)    
Predicted Functional Partners:
SFM93081.1
Hypothetical protein.
  
  
 0.691
SFL95263.1
RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family.
     
 0.562
YedY_1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
 
     0.559
Ndh_4
NADH dehydrogenase.
       0.553
YedY_2
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
 
     0.510
fdhD
FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.485
HiuH
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
   0.467
ahpC
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
   
  
 0.424
moeA
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
 
 
 0.416
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit.
   
 
 0.413
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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