Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL60991.1 | SFL61023.1 | SAMN05444423_101267 | SAMN05444423_101268 | RecB family nuclease, putative, TM0106 family. | Hypothetical protein. | 0.917 |
SFL60991.1 | SFL61052.1 | SAMN05444423_101267 | SAMN05444423_101269 | RecB family nuclease, putative, TM0106 family. | Hypothetical protein. | 0.571 |
SFL60991.1 | SFL61082.1 | SAMN05444423_101267 | SAMN05444423_101270 | RecB family nuclease, putative, TM0106 family. | Uncharacterized protein YcnI. | 0.515 |
SFL60991.1 | SFL61144.1 | SAMN05444423_101267 | SAMN05444423_101272 | RecB family nuclease, putative, TM0106 family. | Putative copper resistance protein D. | 0.511 |
SFL60991.1 | YcnJ_1 | SAMN05444423_101267 | SAMN05444423_101271 | RecB family nuclease, putative, TM0106 family. | Hypothetical protein. | 0.495 |
SFL60991.1 | htpG | SAMN05444423_101267 | SAMN05444423_101266 | RecB family nuclease, putative, TM0106 family. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.752 |
SFL61023.1 | SFL60991.1 | SAMN05444423_101268 | SAMN05444423_101267 | Hypothetical protein. | RecB family nuclease, putative, TM0106 family. | 0.917 |
SFL61023.1 | SFL61052.1 | SAMN05444423_101268 | SAMN05444423_101269 | Hypothetical protein. | Hypothetical protein. | 0.803 |
SFL61023.1 | SFL61082.1 | SAMN05444423_101268 | SAMN05444423_101270 | Hypothetical protein. | Uncharacterized protein YcnI. | 0.685 |
SFL61023.1 | SFL61144.1 | SAMN05444423_101268 | SAMN05444423_101272 | Hypothetical protein. | Putative copper resistance protein D. | 0.802 |
SFL61023.1 | SFL61171.1 | SAMN05444423_101268 | SAMN05444423_101273 | Hypothetical protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.543 |
SFL61023.1 | YcnJ_1 | SAMN05444423_101268 | SAMN05444423_101271 | Hypothetical protein. | Hypothetical protein. | 0.810 |
SFL61023.1 | htpG | SAMN05444423_101268 | SAMN05444423_101266 | Hypothetical protein. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.579 |
SFL61023.1 | rraA | SAMN05444423_101268 | SAMN05444423_101274 | Hypothetical protein. | Regulator of ribonuclease activity A; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions. | 0.574 |
SFL61052.1 | SFL60991.1 | SAMN05444423_101269 | SAMN05444423_101267 | Hypothetical protein. | RecB family nuclease, putative, TM0106 family. | 0.571 |
SFL61052.1 | SFL61023.1 | SAMN05444423_101269 | SAMN05444423_101268 | Hypothetical protein. | Hypothetical protein. | 0.803 |
SFL61052.1 | SFL61082.1 | SAMN05444423_101269 | SAMN05444423_101270 | Hypothetical protein. | Uncharacterized protein YcnI. | 0.683 |
SFL61052.1 | SFL61144.1 | SAMN05444423_101269 | SAMN05444423_101272 | Hypothetical protein. | Putative copper resistance protein D. | 0.690 |
SFL61052.1 | SFL61171.1 | SAMN05444423_101269 | SAMN05444423_101273 | Hypothetical protein. | Polyketide cyclase / dehydrase and lipid transport. | 0.543 |
SFL61052.1 | YcnJ_1 | SAMN05444423_101269 | SAMN05444423_101271 | Hypothetical protein. | Hypothetical protein. | 0.691 |
page 1 of 4