STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mceBphospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (341 aa)    
Predicted Functional Partners:
mceA
Virulence factor Mce family protein.
  
 0.976
mceE
Virulence factor Mce family protein.
 
  
 0.975
mceF
Virulence factor Mce family protein.
 
   
 0.971
yrbEB
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 
 0.941
yrbEA
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 
 0.939
mceA-5
Virulence factor Mce family protein.
  
 0.901
mceA-3
Virulence factor Mce family protein.
  
 0.900
mceC-5
Virulence factor Mce family protein.
  
 0.899
mceA-4
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
  
 0.896
mceE-5
Virulence factor Mce family protein.
 
  
 0.895
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.