Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL69278.1 | SFL69350.1 | SAMN05444423_101553 | SAMN05444423_101556 | Hypothetical protein. | Signal transduction histidine kinase. | 0.627 |
SFL69278.1 | SFL69398.1 | SAMN05444423_101553 | SAMN05444423_101558 | Hypothetical protein. | Protein of unknown function. | 0.627 |
SFL69278.1 | VraR_1 | SAMN05444423_101553 | SAMN05444423_101557 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.551 |
SFL69278.1 | YhhT_2 | SAMN05444423_101553 | SAMN05444423_101555 | Hypothetical protein. | Predicted PurR-regulated permease PerM. | 0.743 |
SFL69278.1 | cya-2 | SAMN05444423_101553 | SAMN05444423_101554 | Hypothetical protein. | Adenylate cyclase. | 0.802 |
SFL69350.1 | SFL69278.1 | SAMN05444423_101556 | SAMN05444423_101553 | Signal transduction histidine kinase. | Hypothetical protein. | 0.627 |
SFL69350.1 | SFL69398.1 | SAMN05444423_101556 | SAMN05444423_101558 | Signal transduction histidine kinase. | Protein of unknown function. | 0.823 |
SFL69350.1 | SFL69423.1 | SAMN05444423_101556 | SAMN05444423_101559 | Signal transduction histidine kinase. | Predicted membrane protein. | 0.560 |
SFL69350.1 | SFM20320.1 | SAMN05444423_101556 | SAMN05444423_102219 | Signal transduction histidine kinase. | Hypothetical protein. | 0.596 |
SFL69350.1 | SFM82168.1 | SAMN05444423_101556 | SAMN05444423_104350 | Signal transduction histidine kinase. | Hypothetical protein. | 0.461 |
SFL69350.1 | SFN15704.1 | SAMN05444423_101556 | SAMN05444423_106319 | Signal transduction histidine kinase. | Protein of unknown function. | 0.422 |
SFL69350.1 | VraR_1 | SAMN05444423_101556 | SAMN05444423_101557 | Signal transduction histidine kinase. | Two component transcriptional regulator, LuxR family. | 0.971 |
SFL69350.1 | YhhT_2 | SAMN05444423_101556 | SAMN05444423_101555 | Signal transduction histidine kinase. | Predicted PurR-regulated permease PerM. | 0.802 |
SFL69350.1 | YkoD | SAMN05444423_101556 | SAMN05444423_103467 | Signal transduction histidine kinase. | Energy-coupling factor transport system ATP-binding protein. | 0.433 |
SFL69350.1 | cya-2 | SAMN05444423_101556 | SAMN05444423_101554 | Signal transduction histidine kinase. | Adenylate cyclase. | 0.601 |
SFL69398.1 | SFL69278.1 | SAMN05444423_101558 | SAMN05444423_101553 | Protein of unknown function. | Hypothetical protein. | 0.627 |
SFL69398.1 | SFL69350.1 | SAMN05444423_101558 | SAMN05444423_101556 | Protein of unknown function. | Signal transduction histidine kinase. | 0.823 |
SFL69398.1 | SFN15704.1 | SAMN05444423_101558 | SAMN05444423_106319 | Protein of unknown function. | Protein of unknown function. | 0.576 |
SFL69398.1 | VraR_1 | SAMN05444423_101558 | SAMN05444423_101557 | Protein of unknown function. | Two component transcriptional regulator, LuxR family. | 0.773 |
SFL69398.1 | YhhT_2 | SAMN05444423_101558 | SAMN05444423_101555 | Protein of unknown function. | Predicted PurR-regulated permease PerM. | 0.727 |
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