STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM15404.1Ornithine cyclodeaminase/alanine dehydrogenase. (326 aa)    
Predicted Functional Partners:
SFL71861.1
Alanine-synthesizing transaminase.
    
 0.909
SFN46335.1
Alanine-synthesizing transaminase.
    
 0.909
ald
L-alanine dehydrogenase; Belongs to the AlaDH/PNT family.
    
  0.903
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.814
GuaD_2
tRNA(Arg) A34 adenosine deaminase TadA.
       0.779
SFM15510.1
Nucleoside-binding protein.
 
    0.754
SFM15451.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.720
SFM15432.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.712
RbsA
Nucleoside ABC transporter ATP-binding protein.
  
    0.712
SFL89974.1
Ornithine cyclodeaminase.
  
     0.603
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.