STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SsuB_6NitT/TauT family transport system ATP-binding protein. (282 aa)    
Predicted Functional Partners:
SsuC_5
NitT/TauT family transport system permease protein.
  
 0.973
SFM21136.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
  
 0.969
ssuC-2
Sulfonate transport system permease protein.
  
 0.890
ssuC-3
Sulfonate transport system permease protein.
  
 0.876
ssuC
Sulfonate transport system permease protein.
  
 0.873
CmpB_2
NitT/TauT family transport system permease protein.
  
 0.869
CmpB_1
NitT/TauT family transport system permease protein.
  
 0.862
SsuC_6
NitT/TauT family transport system permease protein/sulfonate transport system permease protein.
  
 0.862
NtaA_4
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family.
 
  
 0.835
SsuC_3
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 0.810
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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