Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Btr_4 | FeaR_4 | SAMN05444423_104505 | SAMN05444423_102502 | Transcriptional regulator, AraC family with amidase-like domain. | Transcriptional regulator, AraC family. | 0.408 |
FeaR_4 | Btr_4 | SAMN05444423_102502 | SAMN05444423_104505 | Transcriptional regulator, AraC family. | Transcriptional regulator, AraC family with amidase-like domain. | 0.408 |
FeaR_4 | RipA_2 | SAMN05444423_102502 | SAMN05444423_1011174 | Transcriptional regulator, AraC family. | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | 0.409 |
FeaR_4 | pobA | SAMN05444423_102502 | SAMN05444423_11062 | Transcriptional regulator, AraC family. | P-hydroxybenzoate 3-monooxygenase. | 0.404 |
RipA_2 | FeaR_4 | SAMN05444423_1011174 | SAMN05444423_102502 | Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. | Transcriptional regulator, AraC family. | 0.409 |
pobA | FeaR_4 | SAMN05444423_11062 | SAMN05444423_102502 | P-hydroxybenzoate 3-monooxygenase. | Transcriptional regulator, AraC family. | 0.404 |