STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM30067.1Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; Belongs to the cytochrome P450 family. (953 aa)    
Predicted Functional Partners:
SFM30092.1
fatty-acyl-CoA synthase.
 
   
 0.949
SFM63813.1
Acetyl-CoA acetyltransferase.
 
 
 0.749
menE
O-succinylbenzoic acid--CoA ligase.
  
     0.710
EntA_2
Short-chain dehydrogenase.
  
  
 0.707
SFM63839.1
acetyl-CoA C-acetyltransferase.
 
 
 0.654
SFM63786.1
Hypothetical protein.
 
  
 0.652
SrfAA
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
   
 0.644
SFM02949.1
Acyl transferase domain-containing protein.
  
 0.638
EryA_2
Polyketide synthase 7/polyketide synthase 12/candicidin polyketide synthase FscB.
  
 0.638
PpsA_4
6-methylsalicylic acid synthase.
  
 0.638
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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