Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EmrB | KynB_2 | SAMN05444423_104320 | SAMN05444423_102628 | Drug resistance transporter, EmrB/QacA subfamily. | Kynurenine formamidase. | 0.504 |
FadB2_1 | KynB_2 | SAMN05444423_101932 | SAMN05444423_102628 | 3-hydroxyacyl-CoA dehydrogenase. | Kynurenine formamidase. | 0.403 |
FadB2_1 | PaaH_1 | SAMN05444423_101932 | SAMN05444423_101397 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.929 |
FadB2_1 | hbd-2 | SAMN05444423_101932 | SAMN05444423_107111 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.903 |
KynB_2 | EmrB | SAMN05444423_102628 | SAMN05444423_104320 | Kynurenine formamidase. | Drug resistance transporter, EmrB/QacA subfamily. | 0.504 |
KynB_2 | FadB2_1 | SAMN05444423_102628 | SAMN05444423_101932 | Kynurenine formamidase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.403 |
KynB_2 | PaaH_1 | SAMN05444423_102628 | SAMN05444423_101397 | Kynurenine formamidase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.403 |
KynB_2 | PuuR | SAMN05444423_102628 | SAMN05444423_105204 | Kynurenine formamidase. | Transcriptional regulator, XRE family with cupin sensor. | 0.647 |
KynB_2 | SFM47998.1 | SAMN05444423_102628 | SAMN05444423_103101 | Kynurenine formamidase. | Hypothetical protein. | 0.610 |
KynB_2 | Stp_12 | SAMN05444423_102628 | SAMN05444423_102427 | Kynurenine formamidase. | Drug resistance transporter, EmrB/QacA subfamily. | 0.504 |
KynB_2 | YhhT_4 | SAMN05444423_102628 | SAMN05444423_102629 | Kynurenine formamidase. | Predicted PurR-regulated permease PerM. | 0.518 |
KynB_2 | hbd | SAMN05444423_102628 | SAMN05444423_106133 | Kynurenine formamidase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.403 |
KynB_2 | hbd-2 | SAMN05444423_102628 | SAMN05444423_107111 | Kynurenine formamidase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.403 |
PaaH_1 | FadB2_1 | SAMN05444423_101397 | SAMN05444423_101932 | 3-hydroxybutyryl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.929 |
PaaH_1 | KynB_2 | SAMN05444423_101397 | SAMN05444423_102628 | 3-hydroxybutyryl-CoA dehydrogenase. | Kynurenine formamidase. | 0.403 |
PaaH_1 | hbd-2 | SAMN05444423_101397 | SAMN05444423_107111 | 3-hydroxybutyryl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.929 |
PuuR | KynB_2 | SAMN05444423_105204 | SAMN05444423_102628 | Transcriptional regulator, XRE family with cupin sensor. | Kynurenine formamidase. | 0.647 |
SFM47998.1 | KynB_2 | SAMN05444423_103101 | SAMN05444423_102628 | Hypothetical protein. | Kynurenine formamidase. | 0.610 |
Stp_12 | KynB_2 | SAMN05444423_102427 | SAMN05444423_102628 | Drug resistance transporter, EmrB/QacA subfamily. | Kynurenine formamidase. | 0.504 |
YhhT_4 | KynB_2 | SAMN05444423_102629 | SAMN05444423_102628 | Predicted PurR-regulated permease PerM. | Kynurenine formamidase. | 0.518 |
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