STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM57485.1Hypothetical protein. (259 aa)    
Predicted Functional Partners:
SFM77593.1
Hypothetical protein.
  
     0.716
SFM79402.1
Protein of unknown function.
  
     0.709
SFN54421.1
Hypothetical protein.
  
     0.706
SFL82858.1
Hypothetical protein.
  
     0.699
SFM27434.1
Sugar lactone lactonase YvrE.
  
     0.699
SFL60991.1
RecB family nuclease, putative, TM0106 family.
  
     0.698
SFL87425.1
Hypothetical protein.
  
     0.679
SFM51832.1
Anti-sigma-D factor RsdA to sigma factor binding region.
  
     0.679
SFL60178.1
Septum formation.
  
     0.640
SFL81709.1
Hypothetical protein.
  
     0.638
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.