STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM60341.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
EfeN
Dye decolorizing peroxidase.
 
  
 0.994
YcnJ_1
Hypothetical protein.
  
    0.902
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit.
  
 
 0.794
qcrB
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
   
 
 0.756
ctaC
Cytochrome c oxidase subunit 2.
  
   0.744
SFN14283.1
Protein of unknown function.
    
   0.721
ctaE
Cytochrome c oxidase subunit 3.
  
   0.714
ctaF
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
    
 
 0.712
YfeX
Putative iron-dependent peroxidase.
  
  
 0.654
SFM03520.1
Uncharacterized iron-regulated membrane protein.
  
    0.627
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.