STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM63377.13-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (297 aa)    
Predicted Functional Partners:
SFN68990.1
Acyl dehydratase.
 0.960
FabG_5
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.773
SFM63468.1
Acyl-CoA dehydrogenase.
 
  0.766
SFM63441.1
acyl-CoA dehydrogenase/hypothetical protein.
 
 0.761
XecD
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
  
     0.754
SFN69408.1
MaoC like domain-containing protein.
 
 0.740
ButA
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.739
fas1
Fatty acid synthase, bacterial type.
  
 0.723
SFM63404.1
Ferredoxin.
 
     0.710
CaiA_2
Acyl-CoA dehydrogenase.
 
  0.662
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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