Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM64003.1 | SFM64027.1 | SAMN05444423_103681 | SAMN05444423_103682 | Hypothetical protein. | Protein of unknown function. | 0.801 |
SFM64003.1 | SFM64055.1 | SAMN05444423_103681 | SAMN05444423_103683 | Hypothetical protein. | Hypothetical protein. | 0.762 |
SFM64003.1 | SFM64088.1 | SAMN05444423_103681 | SAMN05444423_103684 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.438 |
SFM64027.1 | SFM64003.1 | SAMN05444423_103682 | SAMN05444423_103681 | Protein of unknown function. | Hypothetical protein. | 0.801 |
SFM64027.1 | SFM64055.1 | SAMN05444423_103682 | SAMN05444423_103683 | Protein of unknown function. | Hypothetical protein. | 0.762 |
SFM64027.1 | SFM64088.1 | SAMN05444423_103682 | SAMN05444423_103684 | Protein of unknown function. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.438 |
SFM64055.1 | SFM64003.1 | SAMN05444423_103683 | SAMN05444423_103681 | Hypothetical protein. | Hypothetical protein. | 0.762 |
SFM64055.1 | SFM64027.1 | SAMN05444423_103683 | SAMN05444423_103682 | Hypothetical protein. | Protein of unknown function. | 0.762 |
SFM64055.1 | SFM64088.1 | SAMN05444423_103683 | SAMN05444423_103684 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.444 |
SFM64088.1 | SFM64003.1 | SAMN05444423_103684 | SAMN05444423_103681 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.438 |
SFM64088.1 | SFM64027.1 | SAMN05444423_103684 | SAMN05444423_103682 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Protein of unknown function. | 0.438 |
SFM64088.1 | SFM64055.1 | SAMN05444423_103684 | SAMN05444423_103683 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.444 |