STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM78275.1NADPH:quinone reductase. (315 aa)    
Predicted Functional Partners:
PpsA_4
6-methylsalicylic acid synthase.
 
 
 0.930
SFN36273.1
8-amino-7-oxononanoate synthase.
 
 
 0.922
SFM56099.1
Mycobactin polyketide synthetase MbtC; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.916
pks
Polyketide synthase 13.
 
 
 0.836
Btr_3
Transcriptional regulator, AraC family with amidase-like domain.
  
    0.586
SFM02976.1
Acyl transferase domain-containing protein.
 
 
 0.503
pepN-2
Membrane alanyl aminopeptidase Metallo peptidase. MEROPS family M01.
       0.464
bioF
8-amino-7-oxononanoate synthase.
  
 
 0.460
phoD
Alkaline phosphatase D.
 
      0.412
YhhW_2
Hypothetical protein; Belongs to the pirin family.
 
    0.409
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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