Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EryA_2 | SFM02949.1 | SAMN05444423_105349 | SAMN05444423_1011809 | Polyketide synthase 7/polyketide synthase 12/candicidin polyketide synthase FscB. | Acyl transferase domain-containing protein. | 0.994 |
EryA_2 | SFN00142.1 | SAMN05444423_105349 | SAMN05444423_105303 | Polyketide synthase 7/polyketide synthase 12/candicidin polyketide synthase FscB. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.426 |
SFM02949.1 | EryA_2 | SAMN05444423_1011809 | SAMN05444423_105349 | Acyl transferase domain-containing protein. | Polyketide synthase 7/polyketide synthase 12/candicidin polyketide synthase FscB. | 0.994 |
SFM02949.1 | SFN00142.1 | SAMN05444423_1011809 | SAMN05444423_105303 | Acyl transferase domain-containing protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.426 |
SFN00113.1 | SFN00142.1 | SAMN05444423_105302 | SAMN05444423_105303 | OmpA family protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.421 |
SFN00142.1 | EryA_2 | SAMN05444423_105303 | SAMN05444423_105349 | Pimeloyl-ACP methyl ester carboxylesterase. | Polyketide synthase 7/polyketide synthase 12/candicidin polyketide synthase FscB. | 0.426 |
SFN00142.1 | SFM02949.1 | SAMN05444423_105303 | SAMN05444423_1011809 | Pimeloyl-ACP methyl ester carboxylesterase. | Acyl transferase domain-containing protein. | 0.426 |
SFN00142.1 | SFN00113.1 | SAMN05444423_105303 | SAMN05444423_105302 | Pimeloyl-ACP methyl ester carboxylesterase. | OmpA family protein. | 0.421 |
SFN00142.1 | SFN00166.1 | SAMN05444423_105303 | SAMN05444423_105304 | Pimeloyl-ACP methyl ester carboxylesterase. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.744 |
SFN00166.1 | SFN00142.1 | SAMN05444423_105304 | SAMN05444423_105303 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.744 |