Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DhbB_1 | DhbE_1 | SAMN05444423_10376 | SAMN05444423_103542 | Bifunctional isochorismate lyase / aryl carrier protein. | Mycobactin salicyl-AMP ligase. | 0.999 |
DhbB_1 | DhbE_2 | SAMN05444423_10376 | SAMN05444423_10373 | Bifunctional isochorismate lyase / aryl carrier protein. | 2,3-dihydroxybenzoate-AMP ligase. | 0.999 |
DhbB_1 | DhbF_8 | SAMN05444423_10376 | SAMN05444423_106254 | Bifunctional isochorismate lyase / aryl carrier protein. | Thioesterase domain-containing protein. | 0.994 |
DhbB_1 | ViuB_2 | SAMN05444423_10376 | SAMN05444423_10585 | Bifunctional isochorismate lyase / aryl carrier protein. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.738 |
DhbB_1 | YhfQ | SAMN05444423_10376 | SAMN05444423_103372 | Bifunctional isochorismate lyase / aryl carrier protein. | Iron complex transport system substrate-binding protein. | 0.479 |
DhbB_1 | YusV_1 | SAMN05444423_10376 | SAMN05444423_10368 | Bifunctional isochorismate lyase / aryl carrier protein. | Iron complex transport system ATP-binding protein. | 0.654 |
DhbB_1 | YusV_6 | SAMN05444423_10376 | SAMN05444423_109234 | Bifunctional isochorismate lyase / aryl carrier protein. | Iron complex transport system ATP-binding protein. | 0.638 |
DhbB_1 | fepC | SAMN05444423_10376 | SAMN05444423_109122 | Bifunctional isochorismate lyase / aryl carrier protein. | Iron complex transport system ATP-binding protein. | 0.639 |
DhbE_1 | DhbB_1 | SAMN05444423_103542 | SAMN05444423_10376 | Mycobactin salicyl-AMP ligase. | Bifunctional isochorismate lyase / aryl carrier protein. | 0.999 |
DhbE_1 | DhbF_8 | SAMN05444423_103542 | SAMN05444423_106254 | Mycobactin salicyl-AMP ligase. | Thioesterase domain-containing protein. | 0.990 |
DhbE_1 | ViuB_2 | SAMN05444423_103542 | SAMN05444423_10585 | Mycobactin salicyl-AMP ligase. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.612 |
DhbE_1 | YusV_1 | SAMN05444423_103542 | SAMN05444423_10368 | Mycobactin salicyl-AMP ligase. | Iron complex transport system ATP-binding protein. | 0.457 |
DhbE_2 | DhbB_1 | SAMN05444423_10373 | SAMN05444423_10376 | 2,3-dihydroxybenzoate-AMP ligase. | Bifunctional isochorismate lyase / aryl carrier protein. | 0.999 |
DhbE_2 | DhbF_8 | SAMN05444423_10373 | SAMN05444423_106254 | 2,3-dihydroxybenzoate-AMP ligase. | Thioesterase domain-containing protein. | 0.990 |
DhbE_2 | ViuB_2 | SAMN05444423_10373 | SAMN05444423_10585 | 2,3-dihydroxybenzoate-AMP ligase. | NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains. | 0.633 |
DhbE_2 | YusV_1 | SAMN05444423_10373 | SAMN05444423_10368 | 2,3-dihydroxybenzoate-AMP ligase. | Iron complex transport system ATP-binding protein. | 0.470 |
DhbE_2 | YusV_6 | SAMN05444423_10373 | SAMN05444423_109234 | 2,3-dihydroxybenzoate-AMP ligase. | Iron complex transport system ATP-binding protein. | 0.460 |
DhbE_2 | fepC | SAMN05444423_10373 | SAMN05444423_109122 | 2,3-dihydroxybenzoate-AMP ligase. | Iron complex transport system ATP-binding protein. | 0.462 |
DhbF_8 | DhbB_1 | SAMN05444423_106254 | SAMN05444423_10376 | Thioesterase domain-containing protein. | Bifunctional isochorismate lyase / aryl carrier protein. | 0.994 |
DhbF_8 | DhbE_1 | SAMN05444423_106254 | SAMN05444423_103542 | Thioesterase domain-containing protein. | Mycobactin salicyl-AMP ligase. | 0.990 |
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