STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gluCAmino acid ABC transporter membrane protein 1, PAAT family. (223 aa)    
Predicted Functional Partners:
gluB
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 0.999
gluA
Glutamate transport system ATP-binding protein.
 
 0.998
gluD
Amino acid ABC transporter membrane protein 2, PAAT family.
 
0.997
ArtM_3
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.933
TcyC_1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
 
 0.932
TcyC_2
Polar amino acid transport system ATP-binding protein.
 
 
 0.928
tcyA
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.923
tcyB
Cystine transport system permease protein.
0.899
Peb1A
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.891
GlnH_1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.887
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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