Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FldA | SFN11881.1 | SAMN05444423_106166 | SAMN05444423_106162 | Multimeric flavodoxin WrbA. | Hypothetical protein. | 0.469 |
FldA | SFN11907.1 | SAMN05444423_106166 | SAMN05444423_106163 | Multimeric flavodoxin WrbA. | Hypothetical protein. | 0.464 |
FldA | SFN11939.1 | SAMN05444423_106166 | SAMN05444423_106164 | Multimeric flavodoxin WrbA. | Signal transduction histidine kinase. | 0.464 |
FldA | SFN12018.1 | SAMN05444423_106166 | SAMN05444423_106167 | Multimeric flavodoxin WrbA. | Hypothetical protein. | 0.845 |
FldA | UhpA_2 | SAMN05444423_106166 | SAMN05444423_106165 | Multimeric flavodoxin WrbA. | Two component transcriptional regulator, LuxR family. | 0.464 |
FldA | dapB | SAMN05444423_106166 | SAMN05444423_106168 | Multimeric flavodoxin WrbA. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.850 |
SFM20320.1 | SFN11907.1 | SAMN05444423_102219 | SAMN05444423_106163 | Hypothetical protein. | Hypothetical protein. | 0.596 |
SFM20320.1 | SFN11939.1 | SAMN05444423_102219 | SAMN05444423_106164 | Hypothetical protein. | Signal transduction histidine kinase. | 0.596 |
SFM20320.1 | UhpA_2 | SAMN05444423_102219 | SAMN05444423_106165 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.430 |
SFM51591.1 | SFN11907.1 | SAMN05444423_103236 | SAMN05444423_106163 | Phage shock protein C (PspC) family protein. | Hypothetical protein. | 0.598 |
SFM51591.1 | SFN11939.1 | SAMN05444423_103236 | SAMN05444423_106164 | Phage shock protein C (PspC) family protein. | Signal transduction histidine kinase. | 0.559 |
SFM51591.1 | SFN15704.1 | SAMN05444423_103236 | SAMN05444423_106319 | Phage shock protein C (PspC) family protein. | Protein of unknown function. | 0.499 |
SFN11881.1 | FldA | SAMN05444423_106162 | SAMN05444423_106166 | Hypothetical protein. | Multimeric flavodoxin WrbA. | 0.469 |
SFN11881.1 | SFN11907.1 | SAMN05444423_106162 | SAMN05444423_106163 | Hypothetical protein. | Hypothetical protein. | 0.645 |
SFN11881.1 | SFN11939.1 | SAMN05444423_106162 | SAMN05444423_106164 | Hypothetical protein. | Signal transduction histidine kinase. | 0.645 |
SFN11881.1 | SFN12018.1 | SAMN05444423_106162 | SAMN05444423_106167 | Hypothetical protein. | Hypothetical protein. | 0.448 |
SFN11881.1 | UhpA_2 | SAMN05444423_106162 | SAMN05444423_106165 | Hypothetical protein. | Two component transcriptional regulator, LuxR family. | 0.645 |
SFN11881.1 | dapB | SAMN05444423_106162 | SAMN05444423_106168 | Hypothetical protein. | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.448 |
SFN11907.1 | FldA | SAMN05444423_106163 | SAMN05444423_106166 | Hypothetical protein. | Multimeric flavodoxin WrbA. | 0.464 |
SFN11907.1 | SFM20320.1 | SAMN05444423_106163 | SAMN05444423_102219 | Hypothetical protein. | Hypothetical protein. | 0.596 |
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