STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BchIMagnesium chelatase subunit D. (691 aa)    
Predicted Functional Partners:
hemG
Oxygen-dependent protoporphyrinogen oxidase.
  
 
 0.963
cobN
Cobaltochelatase CobN subunit.
 
 
 0.956
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.944
cobB
Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.921
cobO
cob(I)yrinic acid a,c-diamide adenosyltransferase.
 
   
 0.911
HemG
Menaquinone-dependent protoporphyrinogen oxidase.
     
  0.900
SFN13254.1
ElaA protein.
     
 0.850
cobIJ
Precorrin-2 C(20)-methyltransferase/precorrin-3B C(17)-methyltransferase; Precorrin-3 methyltransferase /precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase.
 
   
 0.836
cobL
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
   
 0.794
crtB
Phytoene synthase.
 
  
 0.743
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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