STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lip2_3Acetyl esterase. (340 aa)    
Predicted Functional Partners:
MlhB_2
Acetyl esterase/lipase.
  
   
 0.758
Lip1
Dienelactone hydrolase.
  
  
 0.720
lip-3
Hypothetical protein.
     
 0.717
AcoD
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.497
ThcA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.497
xerC
Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.493
SFN64094.1
Hypothetical protein.
   
 0.479
SFM02949.1
Acyl transferase domain-containing protein.
  
 
 0.437
EryA_2
Polyketide synthase 7/polyketide synthase 12/candicidin polyketide synthase FscB.
  
 
 0.437
lepB
Signal peptidase I Serine peptidase. MEROPS family S26A; Belongs to the peptidase S26 family.
  
 
 0.405
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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