STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN32585.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
qor
NADPH2:quinone reductase.
       0.747
EccD1_1
Type VII secretion integral membrane protein EccD.
  
     0.696
EccE1_1
Type VII secretion protein EccE.
  
     0.675
PimE_1
Alpha-1,2-mannosyltransferase.
  
     0.575
SFN54972.1
Hypothetical protein.
  
     0.561
SFN12717.1
Protein of unknown function.
  
     0.557
SFN34134.1
Hypothetical protein.
  
     0.556
SFM03358.1
Hypothetical protein.
  
     0.552
SFM82486.1
Alpha/beta hydrolase.
 
     0.545
EccD1_2
Type VII secretion integral membrane protein EccD.
  
     0.520
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.