Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN34134.1 | argF | SAMN05444423_108184 | SAMN05444423_110189 | Hypothetical protein. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.504 |
SFN34134.1 | carA | SAMN05444423_108184 | SAMN05444423_108183 | Hypothetical protein. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.981 |
SFN34134.1 | carB | SAMN05444423_108184 | SAMN05444423_108182 | Hypothetical protein. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.989 |
SFN34134.1 | gltB | SAMN05444423_108184 | SAMN05444423_101289 | Hypothetical protein. | Glutamate synthase (NADH) large subunit. | 0.488 |
SFN34134.1 | purF | SAMN05444423_108184 | SAMN05444423_103604 | Hypothetical protein. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.550 |
SFN34134.1 | purQ | SAMN05444423_108184 | SAMN05444423_103618 | Hypothetical protein. | Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...] | 0.452 |
SFN34134.1 | pyrB | SAMN05444423_108184 | SAMN05444423_108186 | Hypothetical protein. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.962 |
SFN34134.1 | pyrC | SAMN05444423_108184 | SAMN05444423_108185 | Hypothetical protein. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.964 |
SFN34134.1 | pyrF | SAMN05444423_108184 | SAMN05444423_108181 | Hypothetical protein. | Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.961 |
SFN34134.1 | pyrR | SAMN05444423_108184 | SAMN05444423_108187 | Hypothetical protein. | Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant. | 0.956 |
argF | SFN34134.1 | SAMN05444423_110189 | SAMN05444423_108184 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein. | 0.504 |
argF | carA | SAMN05444423_110189 | SAMN05444423_108183 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.943 |
argF | carB | SAMN05444423_110189 | SAMN05444423_108182 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.972 |
argF | gltB | SAMN05444423_110189 | SAMN05444423_101289 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Glutamate synthase (NADH) large subunit. | 0.721 |
argF | pyrB | SAMN05444423_110189 | SAMN05444423_108186 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.869 |
argF | pyrC | SAMN05444423_110189 | SAMN05444423_108185 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.424 |
carA | SFN34134.1 | SAMN05444423_108183 | SAMN05444423_108184 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Hypothetical protein. | 0.981 |
carA | argF | SAMN05444423_108183 | SAMN05444423_110189 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.943 |
carA | carB | SAMN05444423_108183 | SAMN05444423_108182 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
carA | gltB | SAMN05444423_108183 | SAMN05444423_101289 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Glutamate synthase (NADH) large subunit. | 0.947 |
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