STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN46132.1Protein of unknown function. (175 aa)    
Predicted Functional Partners:
SFN46156.1
Predicted alpha/beta hydrolase.
       0.799
UgpC_3
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
       0.762
BbsG_6
Acyl-CoA dehydrogenase.
  
  
 0.757
cpdA-2
3',5'-cyclic AMP phosphodiesterase CpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
       0.654
SFN46197.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.652
UgpA_2
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.652
YcjP_3
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.652
DhbB_1
Bifunctional isochorismate lyase / aryl carrier protein.
  
 
 0.601
OphA1_3
Ferredoxin-NADP reductase.
  
    0.548
DhbF_8
Thioesterase domain-containing protein.
  
 
 0.542
Your Current Organism:
Nocardia asteroides
NCBI taxonomy Id: 1824
Other names: ATCC 19247, Actinomyces asteroides, Actinomyces eppinger, Actinomyces eppingeri, Asteroides asteroides, CCM 2754, CCUG 10073, CIP 104503, Cladothrix asteroides, DSM 43373, DSM 43757, Discomyces asteroides, IFO 15531, IMET 7547, JCM 3384, N. asteroides, NBRC 15531, NCTC 11293, NRRL B-3828, Oospora asteroides, Proactinomyces asteroides, Streptothrix eppingerii, Streptotrix asteroides
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.