Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FabH_3 | FabH_7 | SAMN05444423_101531 | SAMN05444423_1011680 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 0.964 |
FabH_3 | SFL99828.1 | SAMN05444423_101531 | SAMN05444423_1011679 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 0.904 |
FabH_3 | SFN31579.1 | SAMN05444423_101531 | SAMN05444423_10883 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase-3/clorobiocin biosynthesis protein CloN2. | 0.918 |
FabH_3 | accD-8 | SAMN05444423_101531 | SAMN05444423_109207 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.864 |
FabH_3 | fabD | SAMN05444423_101531 | SAMN05444423_104493 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | [acyl-carrier-protein] S-malonyltransferase. | 0.964 |
FabH_3 | fabF-3 | SAMN05444423_101531 | SAMN05444423_110128 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.966 |
FabH_3 | fabG | SAMN05444423_101531 | SAMN05444423_104229 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.702 |
FabH_3 | fabG-2 | SAMN05444423_101531 | SAMN05444423_105155 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.739 |
FabH_3 | fabG-4 | SAMN05444423_101531 | SAMN05444423_10938 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.702 |
FabH_3 | fas1 | SAMN05444423_101531 | SAMN05444423_10447 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | Fatty acid synthase, bacterial type. | 0.986 |
FabH_7 | FabH_3 | SAMN05444423_1011680 | SAMN05444423_101531 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 0.964 |
FabH_7 | SFL99828.1 | SAMN05444423_1011680 | SAMN05444423_1011679 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 0.978 |
FabH_7 | SFN31579.1 | SAMN05444423_1011680 | SAMN05444423_10883 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase-3/clorobiocin biosynthesis protein CloN2. | 0.911 |
FabH_7 | accD-8 | SAMN05444423_1011680 | SAMN05444423_109207 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.871 |
FabH_7 | fabD | SAMN05444423_1011680 | SAMN05444423_104493 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | [acyl-carrier-protein] S-malonyltransferase. | 0.983 |
FabH_7 | fabF-3 | SAMN05444423_1011680 | SAMN05444423_110128 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.970 |
FabH_7 | fabG | SAMN05444423_1011680 | SAMN05444423_104229 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.702 |
FabH_7 | fabG-2 | SAMN05444423_1011680 | SAMN05444423_105155 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.788 |
FabH_7 | fabG-4 | SAMN05444423_1011680 | SAMN05444423_10938 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.702 |
FabH_7 | fas1 | SAMN05444423_1011680 | SAMN05444423_10447 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | Fatty acid synthase, bacterial type. | 0.986 |
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