Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KefC | SFN56249.1 | SAMN05444423_110184 | SAMN05444423_110180 | Transporter, CPA2 family. | Hypothetical protein. | 0.541 |
KefC | SFN56288.1 | SAMN05444423_110184 | SAMN05444423_110181 | Transporter, CPA2 family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.548 |
KefC | SFN56323.1 | SAMN05444423_110184 | SAMN05444423_110182 | Transporter, CPA2 family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.548 |
KefC | SFN56355.1 | SAMN05444423_110184 | SAMN05444423_110183 | Transporter, CPA2 family. | YCII-related domain-containing protein. | 0.548 |
KefC | argB | SAMN05444423_110184 | SAMN05444423_110187 | Transporter, CPA2 family. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.603 |
KefC | argC | SAMN05444423_110184 | SAMN05444423_110185 | Transporter, CPA2 family. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.603 |
KefC | argJ | SAMN05444423_110184 | SAMN05444423_110186 | Transporter, CPA2 family. | Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.615 |
SFM15260.1 | SFN35131.1 | SAMN05444423_10215 | SAMN05444423_108216 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.753 |
SFM15260.1 | SFN56288.1 | SAMN05444423_10215 | SAMN05444423_110181 | Uncharacterized conserved protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.770 |
SFM15260.1 | SFN56323.1 | SAMN05444423_10215 | SAMN05444423_110182 | Uncharacterized conserved protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.770 |
SFM78614.1 | SFN56288.1 | SAMN05444423_104220 | SAMN05444423_110181 | Uncharacterized conserved protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.752 |
SFM78614.1 | SFN56323.1 | SAMN05444423_104220 | SAMN05444423_110182 | Uncharacterized conserved protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.739 |
SFN35131.1 | SFM15260.1 | SAMN05444423_108216 | SAMN05444423_10215 | Uncharacterized conserved protein. | Uncharacterized conserved protein. | 0.753 |
SFN35131.1 | SFN56288.1 | SAMN05444423_108216 | SAMN05444423_110181 | Uncharacterized conserved protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.792 |
SFN35131.1 | SFN56323.1 | SAMN05444423_108216 | SAMN05444423_110182 | Uncharacterized conserved protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.792 |
SFN35131.1 | SFN56355.1 | SAMN05444423_108216 | SAMN05444423_110183 | Uncharacterized conserved protein. | YCII-related domain-containing protein. | 0.769 |
SFN56249.1 | KefC | SAMN05444423_110180 | SAMN05444423_110184 | Hypothetical protein. | Transporter, CPA2 family. | 0.541 |
SFN56249.1 | SFN56288.1 | SAMN05444423_110180 | SAMN05444423_110181 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.762 |
SFN56249.1 | SFN56323.1 | SAMN05444423_110180 | SAMN05444423_110182 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.762 |
SFN56249.1 | SFN56355.1 | SAMN05444423_110180 | SAMN05444423_110183 | Hypothetical protein. | YCII-related domain-containing protein. | 0.762 |
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