Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FrdB | SFN85715.1 | SAMN05444423_101426 | SAMN05444423_1179 | Succinate dehydrogenase subunit B. | SnoaL-like domain-containing protein. | 0.484 |
FrdB | nuoD | SAMN05444423_101426 | SAMN05444423_102405 | Succinate dehydrogenase subunit B. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.797 |
SFM33363.1 | SFN85715.1 | SAMN05444423_102743 | SAMN05444423_1179 | Transcriptional regulator, TetR family. | SnoaL-like domain-containing protein. | 0.440 |
SFM57717.1 | SFN76518.1 | SAMN05444423_103446 | SAMN05444423_11345 | Uncharacterized conserved protein, DUF1330 family. | Transcriptional regulator, XRE family. | 0.407 |
SFM57717.1 | SFN85715.1 | SAMN05444423_103446 | SAMN05444423_1179 | Uncharacterized conserved protein, DUF1330 family. | SnoaL-like domain-containing protein. | 0.480 |
SFM60014.1 | SFN85715.1 | SAMN05444423_103535 | SAMN05444423_1179 | DNA-binding transcriptional regulator, XRE-family HTH domain. | SnoaL-like domain-containing protein. | 0.744 |
SFM72141.1 | SFN85715.1 | SAMN05444423_1041 | SAMN05444423_1179 | Hypothetical protein. | SnoaL-like domain-containing protein. | 0.461 |
SFM86182.1 | SFN85715.1 | SAMN05444423_104518 | SAMN05444423_1179 | Transcriptional regulator, contains XRE-family HTH domain. | SnoaL-like domain-containing protein. | 0.751 |
SFN76518.1 | SFM57717.1 | SAMN05444423_11345 | SAMN05444423_103446 | Transcriptional regulator, XRE family. | Uncharacterized conserved protein, DUF1330 family. | 0.407 |
SFN76518.1 | SFN85715.1 | SAMN05444423_11345 | SAMN05444423_1179 | Transcriptional regulator, XRE family. | SnoaL-like domain-containing protein. | 0.764 |
SFN85678.1 | SFN85715.1 | SAMN05444423_1178 | SAMN05444423_1179 | Hypothetical protein. | SnoaL-like domain-containing protein. | 0.690 |
SFN85678.1 | SFN85754.1 | SAMN05444423_1178 | SAMN05444423_11710 | Hypothetical protein. | Regulatory protein, luxR family. | 0.460 |
SFN85715.1 | FrdB | SAMN05444423_1179 | SAMN05444423_101426 | SnoaL-like domain-containing protein. | Succinate dehydrogenase subunit B. | 0.484 |
SFN85715.1 | SFM33363.1 | SAMN05444423_1179 | SAMN05444423_102743 | SnoaL-like domain-containing protein. | Transcriptional regulator, TetR family. | 0.440 |
SFN85715.1 | SFM57717.1 | SAMN05444423_1179 | SAMN05444423_103446 | SnoaL-like domain-containing protein. | Uncharacterized conserved protein, DUF1330 family. | 0.480 |
SFN85715.1 | SFM60014.1 | SAMN05444423_1179 | SAMN05444423_103535 | SnoaL-like domain-containing protein. | DNA-binding transcriptional regulator, XRE-family HTH domain. | 0.744 |
SFN85715.1 | SFM72141.1 | SAMN05444423_1179 | SAMN05444423_1041 | SnoaL-like domain-containing protein. | Hypothetical protein. | 0.461 |
SFN85715.1 | SFM86182.1 | SAMN05444423_1179 | SAMN05444423_104518 | SnoaL-like domain-containing protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.751 |
SFN85715.1 | SFN76518.1 | SAMN05444423_1179 | SAMN05444423_11345 | SnoaL-like domain-containing protein. | Transcriptional regulator, XRE family. | 0.764 |
SFN85715.1 | SFN85678.1 | SAMN05444423_1179 | SAMN05444423_1178 | SnoaL-like domain-containing protein. | Hypothetical protein. | 0.690 |
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