STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001623565_02240Unannotated protein. (86 aa)    
Predicted Functional Partners:
GCA_001623565_01425
Unannotated protein.
  
  
 0.693
GCA_001623565_00655
Unannotated protein.
   
    0.659
GCA_001623565_02239
Unannotated protein.
       0.649
GCA_001623565_01699
Unannotated protein.
  
  
 0.619
GCA_001623565_00981
Unannotated protein.
    
   0.584
GCA_001623565_02148
Unannotated protein.
    
   0.584
GCA_001623565_00643
Unannotated protein.
   
    0.553
GCA_001623565_02241
Unannotated protein.
 
     0.523
GCA_001623565_00668
Unannotated protein.
   
    0.508
GCA_001623565_01228
Unannotated protein.
   
    0.508
Your Current Organism:
Streptococcus marmotae
NCBI taxonomy Id: 1825069
Other names: CGMCC 1.15534, DSM 101995, S. marmotae, Streptococcus marmotae Niu et al. 2016, Streptococcus sp. HTS17, Streptococcus sp. HTS30, Streptococcus sp. HTS5, Streptococcus sp. HTS6, Streptococcus sp. HTS7, strain HTS5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.