STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001723685_00517Unannotated protein. (117 aa)    
Predicted Functional Partners:
GCA_001723685_03090
Unannotated protein.
   
 0.895
GCA_001723685_00308
Unannotated protein.
   
  0.848
GCA_001723685_03099
Unannotated protein.
    
 0.829
GCA_001723685_00410
Unannotated protein.
   
 0.813
GCA_001723685_01401
Unannotated protein.
   
 0.813
GCA_001723685_03167
Unannotated protein.
   
  0.805
GCA_001723685_03176
Unannotated protein.
   
  0.805
GCA_001723685_02680
Unannotated protein.
  
 
  0.778
GCA_001723685_01709
Unannotated protein.
   
 
 0.777
GCA_001723685_00645
Unannotated protein.
   
 
 0.774
Your Current Organism:
Marithrix sp. Canyon
NCBI taxonomy Id: 1827136
Other names: C. Marithrix sp. Canyon 246, Candidatus Marithrix sp. Canyon 246
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.