STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001723685_03004Unannotated protein. (416 aa)    
Predicted Functional Partners:
GCA_001723685_03003
Unannotated protein.
       0.773
GCA_001723685_03002
Unannotated protein.
       0.709
GCA_001723685_00085
Unannotated protein.
     
 0.690
GCA_001723685_00379
Unannotated protein.
    
 0.664
GCA_001723685_03055
Unannotated protein.
 
  
 0.616
GCA_001723685_03005
Unannotated protein.
       0.557
GCA_001723685_00860
Unannotated protein.
   
    0.553
GCA_001723685_00866
Unannotated protein.
   
    0.553
GCA_001723685_01313
Unannotated protein.
  
  
 0.546
GCA_001723685_03006
Unannotated protein.
       0.539
Your Current Organism:
Marithrix sp. Canyon
NCBI taxonomy Id: 1827136
Other names: C. Marithrix sp. Canyon 246, Candidatus Marithrix sp. Canyon 246
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.