STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQW38029.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (599 aa)    
Predicted Functional Partners:
OQW38028.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.978
OQW38030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.943
OQW30249.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.907
OQW30247.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.789
OQW30245.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.785
OQW38032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.785
OQW38031.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.737
OQW34023.1
Adaptor protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpS family.
  
     0.705
OQW33129.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.603
OQW34472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.567
Your Current Organism:
Nitrospira sp. SGbin1
NCBI taxonomy Id: 1827376
Other names: N. sp. SG-bin1, Nitrospira sp. SG-bin1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.