STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQW36299.1Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (379 aa)    
Predicted Functional Partners:
OQW36300.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.827
hemE
stearoyl-CoA 9-desaturase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
 
 0.754
OQW32011.1
Hypothetical protein; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
    
 0.753
OQW36570.1
HemD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.745
prmC
Hypothetical protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
 
  
 0.721
rlmN
Hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
 
   
 0.689
OQW36302.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.646
OQW36301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.645
OQW36303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.636
OQW38152.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.614
Your Current Organism:
Nitrospira sp. SGbin2
NCBI taxonomy Id: 1827377
Other names: N. sp. SG-bin2, Nitrospira sp. SG-bin2
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