STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQW60584.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)    
Predicted Functional Partners:
OQW60776.1
C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.767
OQW55263.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.686
OQW56574.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.625
OQW55477.1
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.604
OQW57394.1
Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.504
OQW55262.1
Tripartite tricarboxylate transport(TTT) family subunit TctB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.497
OQW60583.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.492
OQW60775.1
Tripartite tricarboxylate transporter TctB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.490
OQW55479.1
Tricarboxylate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.484
OQW60586.1
Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.442
Your Current Organism:
Proteobacteria bacterium SGbin9
NCBI taxonomy Id: 1827385
Other names: P. bacterium SG_bin9, Proteobacteria bacterium SG_bin9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.