STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANC53676.1Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family. (496 aa)    
Predicted Functional Partners:
ANC53677.1
DNA repair photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.607
ANC53093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.523
ANC52472.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.506
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.506
ANC54541.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.489
ANC53761.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.449
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
 
  
 0.445
ANC53020.1
Rod shape-determining protein; Functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.411
Your Current Organism:
Brevundimonas sp. GW460121014LB2
NCBI taxonomy Id: 1827469
Other names: B. sp. GW460-12-10-14-LB2, Brevundimonas sp. GW460-12-10-14-LB2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.