Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00474 | ftsE | GCA_000716895_00474 | GCA_000716895_00470 | Unannotated protein. | Unannotated protein; Part of the ABC transporter FtsEX involved in cellular division. | 0.946 |
GCA_000716895_00474 | hisN | GCA_000716895_00474 | GCA_000716895_00475 | Unannotated protein. | Unannotated protein. | 0.994 |
GCA_000716895_00474 | prfB | GCA_000716895_00474 | GCA_000716895_00473 | Unannotated protein. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.993 |
GCA_000716895_02061 | GCA_000716895_03599 | GCA_000716895_02061 | GCA_000716895_03599 | Unannotated protein. | Unannotated protein. | 0.947 |
GCA_000716895_02061 | GCA_000716895_03927 | GCA_000716895_02061 | GCA_000716895_03927 | Unannotated protein. | Unannotated protein. | 0.985 |
GCA_000716895_02061 | ftsE | GCA_000716895_02061 | GCA_000716895_00470 | Unannotated protein. | Unannotated protein; Part of the ABC transporter FtsEX involved in cellular division. | 0.740 |
GCA_000716895_02061 | hisB | GCA_000716895_02061 | GCA_000716895_00171 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_02061 | hisC1 | GCA_000716895_02061 | GCA_000716895_00172 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.981 |
GCA_000716895_02061 | hisD | GCA_000716895_02061 | GCA_000716895_00173 | Unannotated protein. | Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.993 |
GCA_000716895_02061 | hisN | GCA_000716895_02061 | GCA_000716895_00475 | Unannotated protein. | Unannotated protein. | 0.995 |
GCA_000716895_02061 | prfB | GCA_000716895_02061 | GCA_000716895_00473 | Unannotated protein. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.470 |
GCA_000716895_03599 | GCA_000716895_02061 | GCA_000716895_03599 | GCA_000716895_02061 | Unannotated protein. | Unannotated protein. | 0.947 |
GCA_000716895_03599 | GCA_000716895_03927 | GCA_000716895_03599 | GCA_000716895_03927 | Unannotated protein. | Unannotated protein. | 0.933 |
GCA_000716895_03599 | ftsE | GCA_000716895_03599 | GCA_000716895_00470 | Unannotated protein. | Unannotated protein; Part of the ABC transporter FtsEX involved in cellular division. | 0.984 |
GCA_000716895_03599 | hisB | GCA_000716895_03599 | GCA_000716895_00171 | Unannotated protein. | Unannotated protein. | 0.976 |
GCA_000716895_03599 | hisC1 | GCA_000716895_03599 | GCA_000716895_00172 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.961 |
GCA_000716895_03599 | hisD | GCA_000716895_03599 | GCA_000716895_00173 | Unannotated protein. | Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.970 |
GCA_000716895_03599 | hisN | GCA_000716895_03599 | GCA_000716895_00475 | Unannotated protein. | Unannotated protein. | 0.994 |
GCA_000716895_03599 | ino1 | GCA_000716895_03599 | GCA_000716895_06020 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_000716895_03599 | prfB | GCA_000716895_03599 | GCA_000716895_00473 | Unannotated protein. | Unannotated protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.966 |
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